hoodscanR 1.1.2
Fix bugs in test with R4.4
hoodscanR 1.1.1
Small bug fix:
- when data have cell_id within the colData.
hoodscanR 1.1.0
Published in Bioconductor.
hoodscanR 0.99.5
Remove codes that are commented out.
hoodscanR 0.99.4
user perspective/experience
- documentation update about output values
- output variable/names parameter added to many functions
- validity checks for spatialCoords are added to related functions
- for loops are gone.
hoodscanR 0.99.3
code
- sapply change to vapply.
- validity checks on inputs are now added to all functions using either is(spe, “SpatialExperiment”) or is(m, “matrix”) etc.
vignette
- Explanation of plots and algorithm inside different functions are now added to the vignette briefly.
- BiocStyle are now used.
- BiocStyle to hyperlink packages are now used.
- Fixed typo
documentation
- data description of the test data has been added.
- cross-link key function have added to the package help page.
- the equation and theory of the calcMetrics are now added in the help page.
other
- Bioconductor installation instructions is now added to the readme file.
- code coverage is now almost 85%.
- The LICENSE placeholders is now edited.
hoodscanR 0.99.0
First submission to Bioconductor.