Methods and an evaluation framework for the inference of differential co-expression/association networks.

Installation

Download the package from Bioconductor

if (!requireNamespace("BiocManager", quietly = TRUE))
  install.packages("BiocManager")
BiocManager::install("dcanr")

Or install the development version of the package from Github.

BiocManager::install("DavisLaboratory/dcanr")

Load the installed package into an R session.

library(dcanr)

Example

This example shows how a differential network can be derived. Simulated data within the package is used.

Edges in the differential network are coloured based on the score (negative to positive represented from purple to green respectively).