An example gene expression dataset

A microarray gene expression dataset that was originally obtained from the integrated TGFb-EMT data published by (Foroutan et al, 2017). (ComBat corrected values). tgfb_expr_10 is a subset of the integrated TGFb-EMT data consisting of 10 samples (4 TGFb treated and 6 controls) each with expression values for 11900 genes.

tgfb_expr_10_se

Format

A SummarizedExperiment object

Source

Foroutan et al,2017

References

Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.